I don't know much about coyotes, but couldn't the color difference also be from breeding with dogs? german shepards have similar coat colors.
Another reason to ban you gun lovers! (sarc)http://www.businessinsider.com/yellowstone-female-wolf-832f-killed-by-hunters-2012-12
Could be part dog. I've seen coyotes here in Utah that were almost all black, a color not found in them in nature. When I was a kid in Las Vegas we had a fox terrier bitch that had a litter of coyotes; they looked like coyotes, but had odd coloring.
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